Introduction to long-read genome assembly
New genome sequencing technologies are producing much longer reads. This workshop combines an introductory presentation to introduce the theory of de novo genome assembly with hands-on practice.
It will cover long-read technologies and data types, and provide an overview of genome assembly methods. You will use command-line tools to perform long-read assembly and short-read polishing of bacterial genome data.
This workshop requires a familiarity with Unix and genomics concepts.
Workshop attendees must bring a laptop.