Bioinformatics Meetups

Welcome to our monthly bioinformatics meetups!

We’re a community of people doing bioinformatics in Victoria, organized by Melbourne Bioinformatics and convened by Tom Harrop and Steven Morgan.

We hold informal meetups where we share tools, approaches, and problems. Each session starts with a 20-minute talk followed by open discussion. Whether you’re a solo bioinformatician in a wet lab or part of a bioinformatics group or core, there’s always something new to learn from each other.

Please subscribe to the email list to be notified about the 2023 relaunch.

 

Meetups Schedule

DateSpeakerTopicMore information
05/08/2021Gayle Philip (Melbourne Bioinformatics)Good practices: data and metadata to facilitate analysesSlides
19/08/2021Chol-Hee Jung (Melbourne Bioinformatics)Data quality – Know what you haveSlides
02/09/2021Jessica Chung (Melbourne Bioinformatics)Reproducible research principles of data analysisSlides
16/09/2021Bobbie Shaban (MDAP)Introduction to workflow managersSlides
30/09/2021Sean Crosby (Research Computing Services)HPC options for your data analysisSlides

Helpful links from Sean’s talk:
HPC Dashboard
Cloud Dashboard
Orion Researcher Desktop
RCS Storage
RCS Training

Email Sean at scrosby@nullunimelb.edu.au to discuss your computational needs
14/10/2021Dave Clarke, CSIRO/University of Melbourne, MSc (Bioinformatics)Finding Genes with Hidden Markov Models: How? Does it Work?Slides
28/10/2021Bernie Pope (Melbourne Bioinformatics)Hatch, a plotting librarySlides
11/11/2021Tom Harrop (Melbourne Bioinformatics)A short practical intro to Singularity containersSlides
25/11/2021Jacqueline Heighway (Florey Institute)Accessing publicly available RNA-seq data to support your researchSlides
09/12/2021Gareth Price (Galaxy Australia)New high memory nodes now available to all Galaxy Australia users
17/03/2022Simon Gladman (Melbourne Bioinformatics)Galaxy Australia
31/03/2022Craig Morton (Biochemistry and Pharmacology, Bio21)'Alphafold2: What’s in it for me?'Slides
14/04/2022Stephanie Portelli (Biochemistry and Molecular Biology, University of Melbourne)Analysing missense mutations using structural bioinformatics techniquesSlides
28/04/2022Quentin Gouil (WEHI)Long-read sequencing: principles, methods and applicationsSlides
12/05/2022Torsten Seemann (Peter Doherty Institute)Manipulating tabular data on the command line with csvtkSlides
26/05/2022Steven Morgan (Melbourne Bioinformatics)BLAST – why it’s still relevant
23/06/2022Priyanka Pillai (MDAP)Case studies in health informatics
07/07/2022Ramyar Molania (WEHI)Batch effects in RNA-seq data
21/07/2022Ash Porter (Doherty Institute)The power of epidemiological metadata in phylogeography models
18/08/2022Stefano Mangiola (WEHI)Tidy transcriptomics for single-cell and bulk RNA-seq
15/09/2022Cameron Hyde (QCIF/Galaxy Australia)Using AlphaFold2 on Galaxy
13/10/2022Danny Park (Melbourne Bioinformatics)Doing bioinformatics on a M1 Mac
27/10/2022Shani Amarasinghe (Australian Regenerative Medicine Institute)Single cell pre-processing with scPipe
29/06/2023Davide Vespasiani (WEHI)Using scRNA-seq to investigate gene expression differences across species for blood-related cells
27/07/2023Uditi Shah (COMBINE) Collaborate, Network and Grow in Bioinformatics and Computational Biology through COMBINECANCELLED